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Hi,
When writing and then reading a regular grid to/from disk, the dimensions point
attribute changes from NA
to FALSE
. The two (original and from-disk) versions cannot be concatenated then because, of course, the dimensional attributes don't match.
I assume that I could get/modify/set the dimension attributes so that they match, but I am hopeful that there exists a cleaner way to manage that by controlling read_stars
or write_stars
. Perhaps there magic gdal arguments? I have looked at gdal's geotiff specifications, but nothing jumps out at me.
Below is a small example.
Thanks so much!
Ben
ofile = tempfile(fileext = ".tif")
a = stars::read_stars(system.file("nc/reduced.nc", package = "stars")) |>
dplyr::slice("time",1) |>
dplyr::select("sst") |>
sf::st_set_crs(4326) |>
stars::write_stars(ofile)
#> sst, anom, err, ice,
b = stars::read_stars(ofile)
da = stars::st_dimensions(a)
db = stars::st_dimensions(b)
cat("point in a:", da$x$point, "\n")
#> point in a: NA
cat("point in b:", db$x$point, "\n")
#> point in b: FALSE
c = c(a, b, along = NA_integer_)
#> Error in c.stars(a, b, along = NA_integer_): don't know how to merge arrays: please specify parameter along
sessionInfo()
#> R version 4.4.2 (2024-10-31)
#> Platform: x86_64-apple-darwin20
#> Running under: macOS Sequoia 15.3.2
#>
#> Matrix products: default
#> BLAS: /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/lib/libRblas.0.dylib
#> LAPACK: /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/lib/libRlapack.dylib; LAPACK version 3.12.0
#>
#> locale:
#> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
#>
#> time zone: America/New_York
#> tzcode source: internal
#>
#> attached base packages:
#> [1] stats graphics grDevices utils datasets methods base
#>
#> loaded via a namespace (and not attached):
#> [1] vctrs_0.6.5 cli_3.6.4 knitr_1.48 rlang_1.1.5
#> [5] xfun_0.48 DBI_1.2.3 KernSmooth_2.23-24 generics_0.1.3
#> [9] sf_1.0-19 glue_1.8.0 htmltools_0.5.8.1 e1071_1.7-16
#> [13] rmarkdown_2.28 grid_4.4.2 tibble_3.2.1 evaluate_1.0.0
#> [17] classInt_0.4-11 abind_1.4-8 fastmap_1.2.0 yaml_2.3.10
#> [21] lifecycle_1.0.4 compiler_4.4.2 dplyr_1.1.4 fs_1.6.4
#> [25] pkgconfig_2.0.3 Rcpp_1.0.14 rstudioapi_0.17.0 digest_0.6.37
#> [29] R6_2.6.1 tidyselect_1.2.1 class_7.3-22 reprex_2.1.1
#> [33] pillar_1.10.1 parallel_4.4.2 magrittr_2.0.3 tools_4.4.2
#> [37] withr_3.0.2 proxy_0.4-27 stars_0.6-8 units_0.8-5
Created on 2025-04-07 with reprex v2.1.1
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