Speed up wilcoxon rank-sum test with numba #3529
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flying-sheep
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Benchmark changes
Comparison: https://github.com/scverse/scanpy/compare/30de73326f8d617488f8e64bb14ef5c09d748c15..3991e3afa2e8c8f1b8d6a2bbac3e0014ea9ca2cc More details: https://github.com/scverse/scanpy/pull/3529/checks?check_run_id=39588624031 |
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Co-authored-by: George Wu <59241797+yxwucq@users.noreply.github.com>
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Use njit to speed up
sc.tl.rank_genes_groups(..., method='wilcoxon')See #2390, #2060