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UW Sauro Lab

26 followers
Seattle
http://www.sys-bio.org
hsauro@u.washington.edu

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tellurium tellurium Public

Python Environment for Modeling and Simulating Biological Systems

Python 116 37
roadrunner roadrunner Public

Forked from AndySomogyi/sbmlsolver

libRoadRunner: A high-performance SBML simulator

C++ 50 25

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Showing 10 of 113 repositories

SimpleSEDML Public
A simple API for using the Simulation Experiment Description Markup Language (SED-ML)

sys-bio/SimpleSEDML’s past year of commit activity

Jupyter Notebook 0 MIT 1 3 1 Updated Jun 3, 2025
biomodels_cache Public
Client and admin API for accessing BioModels

sys-bio/biomodels_cache’s past year of commit activity

Python 0 MIT 1 0 0 Updated Jun 2, 2025
WebIridium Public
Web based simulation and analysis of biological models

sys-bio/WebIridium’s past year of commit activity

TypeScript 0 0 0 0 Updated Jun 2, 2025
BMCA-pipeline Public Forked from janisshin/BMCA-pipeline

sys-bio/BMCA-pipeline’s past year of commit activity

Jupyter Notebook 0 MIT 1 0 0 Updated Jun 2, 2025
ratesb_python Public
Analysis of rate laws in reaction networks.

sys-bio/ratesb_python’s past year of commit activity

Python 1 MIT 1 8 0 Updated Jun 1, 2025
BiomodelsCache Public
A biomodels cache for faster lookup.

sys-bio/BiomodelsCache’s past year of commit activity

Python 0 CC0-1.0 1 0 0 Updated Jun 1, 2025
BiomodelsStore Public Forked from konankisa/BiomodelsStore

sys-bio/BiomodelsStore’s past year of commit activity

JavaScript 0 1 0 0 Updated Jun 1, 2025
AntimonyEditor Public
Antimony Web Editor: A Web Editor for the Antimony Modeling Language

sys-bio/AntimonyEditor’s past year of commit activity

TypeScript 0 MIT 2 20 2 Updated May 30, 2025
SimBioUI Public
Web systems biology simulator

sys-bio/SimBioUI’s past year of commit activity

JavaScript 0 MIT 2 15 0 Updated May 30, 2025
cesium Public
Database of Oscillatory and random chemical network models written in Antimony format.

sys-bio/cesium’s past year of commit activity

HTML 0 1 0 0 Updated May 30, 2025

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