germline-variant-calling

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A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data

annotation ngs germline cram ngs-pipeline genotyping germline-variant-calling short-reads

Germline structural variant calling pipeline for short read WGS datasets

workflow bioinformatics pipeline genomics nextflow ngs manta bam survivor structural-variants smoove tiddit germline-variant-calling annotsv dsl2 australian-biocommons

Framework to benchmark germline copy-number variant detection tools from NGS data

Germline Variant Calling Pipeline built in Snakemake

Germline Variants Pipeline

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