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Pull requests: welch-lab/liger

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Pull requests list

fix setting defaultDimRed
#321 opened Sep 25, 2024 by samuel-marsh Loading…
2
Fixed non-conformable matrix bug in online_iNMF
#269 opened Aug 15, 2022 by bnovotny Loading…
Bug in getProportionMito
#252 opened Jan 24, 2022 by jsodicoff Loading…
Fix subsetLiger removing cell.data and reporting 0 cells when no clustering available.
#231 opened Jul 5, 2021 by derpylz Loading…
1
Revert "U algorithm"
#225 opened Jun 14, 2021 by Akriebs Loading…
Updated references to Seurat slots
#136 opened Jan 10, 2020 by jsodicoff • Draft
Added a check to ensure that resolution is defined
#114 opened Aug 30, 2019 by NathanSkene Loading…
Added functionality for Wilcox test and to make Jaccard matrix
#95 opened Jul 29, 2019 by jsodicoff Loading…
2
Changes tsne.coords Matrix slot to dr.coords list slot to store t-SNE and UMAP coords in the same object.
#94 opened Jul 29, 2019 by jsodicoff Loading…
2
Parallelised optimizeALS
#90 opened Jul 22, 2019 by NathanSkene Loading…
1
New tests
#89 opened Jul 19, 2019 by jsodicoff Loading…
1
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